DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bru1 and bru3

DIOPT Version :9

Sequence 1:NP_001260403.1 Gene:bru1 / 34648 FlyBaseID:FBgn0000114 Length:810 Species:Drosophila melanogaster
Sequence 2:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster


Alignment Length:415 Identity:184/415 - (44%)
Similarity:228/415 - (54%) Gaps:58/415 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 MYHPIQMKPADSENRNE---RKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAF 488
            |...:|:|||::|:|:|   ||||||||:|:..|:|||::|...|.|||||:||..:|.||||||
  Fly    21 MNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAF 85

  Fly   489 VTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQI--QANLWN-LASNINI 550
            |.|.::..|.||| ..|..::.|.|.:|.||||:|||:||::.:::||:  ..||.| ...|...
  Fly    86 VKFGSQQEAQSAI-TNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFS 149

  Fly   551 PLGQTATSVTTPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQSSSA 615
            |.|..|..          ||.:.::.|.|..|.|........| .|..|:...|.|.| |..|..
  Fly   150 PYGAYAQQ----------QQQAALMAAAATAPGSAAAYMNPMA-ALATQIPHGLNGTG-QPPSLP 202

  Fly   616 TDTSAVAAAGLLTPMTVQNLAAIAAMTQPSLSNAAAAAAAATS------------PG-SAQLTNT 667
            :.|           |...|:.|.....||..:.||||||||..            || ...||..
  Fly   203 SPT-----------MPNFNMGANTPNGQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTIP 256

  Fly   668 AALLWSDPNPMASAYMSTAAGLPQF---------GSASALSTSPLASVALSAAA--AAAAGKQIE 721
            ...|   ||..|:.......|||.|         |........|||:||.:...  ....|..|.
  Fly   257 PQGL---PNGDAATLQHAFPGLPPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSIS 318

  Fly   722 GPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 786
            ||||||||||||||||.|.:|...|||||||||:|||||:.|:.||||||||||||.|||.||:|
  Fly   319 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQA 383

  Fly   787 MNGFQVGTKRLKVQLKKPKD-SKPY 810
            |||||:|.||||||||:||| |:||
  Fly   384 MNGFQIGMKRLKVQLKRPKDASRPY 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru1NP_001260403.1 RRM1_CELF1_2_Bruno 356..437 CDD:241075 4/9 (44%)
ELAV_HUD_SF 359..808 CDD:273741 181/411 (44%)
RRM2_Bruno_like 443..524 CDD:241080 44/83 (53%)
RRM3_Bruno_like 722..800 CDD:241084 61/77 (79%)
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043 43/80 (54%)
ELAV_HUD_SF 43..404 CDD:273741 170/387 (44%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 61/77 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447743
Domainoid 1 1.000 95 1.000 Domainoid score I2491
eggNOG 1 0.900 - - E1_KOG0144
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110700at50557
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 1 1.000 - - otm3487
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24012
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X208
98.850

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