Protein Alignment bru1 and pAbp

DIOPT Version :9

• Sequence 1: NP_001260403.1
• Gene: bru1 / 34648
• FlyBaseID: FBgn0000114
• Length: 810
• Species: Drosophila melanogaster
• Sequence 2: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Alignment Length: 469
• Identity: 108/469 - (23%)
• Similarity: 171/469 - (36%)
• Gaps: 123/469 - (26%)

  Fly   359 MFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDALHNVKT 423
            ::||.:|:.::||.|.:.|...|.|.||.|.||..|..|.|..:|.|.....|.:|.|.::....
  Fly     4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLV 68

  Fly   424 LNGMYHPIQMKPADSENRNER----KLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSK 484
            .|   .||::..:..:....|    .:|:..|::.::...:...|...|.|..|.|..|:.|.||
  Fly    69 RN---KPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSK 130

  Fly   485 GCAFVTFATKHAAISAI-KVT---LSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLA 545
            |..||.|.|:.||.::| ||.   |:..|:..|...|        :||:|::
  Fly   131 GYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIP--------RKEREKE------------- 174

  Fly   546 SNINIPLGQTATSVTTPILPNPPQ-----------QPSPVLGADAITPASIQLLQQLQAVGLQHQ 599
                  ||:.|...|...:.|..:           :|     ...||...:...:..::.|.
  Fly   175 ------LGEKAKLFTNVYVKNFTEDFDDEKLKEFFEP-----YGKITSYKVMSKEDGKSKGF--- 225

  Fly   600 LLQALTGLGAQQSSSATDTSAVAAAGLLTPMTVQNLAAIAAMTQPSLSNAAAAAAAATSPGSAQL 664
                  |..|.:::.|.:.:..|..|
  Fly   226 ------GFVAFETTEAAEAAVQALNG--------------------------------------- 245

  Fly   665 TNTAALLWSDPNPMASAYMSTAAGLPQFGSASALSTSPLASVALSAAAAAAAGKQIEGPEGCNLF 729
                    .|.....|.|::.|....:            ....|.........|:.|...|.||:
  Fly   246 --------KDMGEGKSLYVARAQKKAE------------RQQELKRKFEELKQKRHESVFGVNLY 290

  Fly   730 IYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGT 794
            :.:|.....|..|...|.|:||:.||||..|:: ..||.||||.|:....|..|:..:||..||:
  Fly   291 VKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGS 354

  Fly   795 KRLKVQLKKPKDSK 808
            |.|.|.|.:.|:.:
  Fly   355 KPLYVALAQRKEER 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru1	NP_001260403.1	RRM1_CELF1_2_Bruno	356..437	CDD:241075	25/77 (32%)
		ELAV_HUD_SF	359..808	CDD:273741	108/467 (23%)
		RRM2_Bruno_like	443..524	CDD:241080	26/88 (30%)
		RRM3_Bruno_like	722..800	CDD:241084	30/77 (39%)
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	108/469 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24012
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010