Protein Alignment bru1 and Celf6

DIOPT Version :9

• Sequence 1: NP_001260403.1
• Gene: bru1 / 34648
• FlyBaseID: FBgn0000114
• Length: 810
• Species: Drosophila melanogaster
• Sequence 2: XP_008764449.1
• Gene: Celf6 / 300758
• RGDID: 1310451
• Length: 481
• Species: Rattus norvegicus
• Alignment Length: 534
• Identity: 233/534 - (43%)
• Similarity: 304/534 - (56%)
• Gaps: 80/534 - (14%)

  Fly   289 PSLGGSNSNALVSVGSNGIMSAAGLVNNNNNPCSANRNVVAMVDDDACFRLDTDATVTYGEKEPD 353
            |.|..|.:::  .||.:|:           ||..|    |.|.|.||
  Rat    16 PRLAFSTADS--GVGMSGL-----------NPGPA----VPMKDHDA------------------ 45

  Fly   354 PDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTRHAALKAQDAL 418
               ||:||||:|:.:||..|:.:|||:|.::.:.||:|:.||:.|||.|:|:..|.:|||||.||
  Rat    46 ---IKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107

  Fly   419 HNVKTLNGMYHPIQMKPADSENRNE-RKLFVGMLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQ 482
            |..|||.||..|||:|||.||.|.| ||||||||.|:..|.|||:||:..|.||||||||..:|.
  Rat   108 HEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGT 172

  Fly   483 SKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASN 547
            |||||||.|.::..|.:||: .|..::.|.|.:|.||||.|||.:|:..:::||:...| .....
  Rat   173 SKGCAFVKFGSQGEAQAAIQ-GLHGSRTMTGASSSLVVKLADTDRERALRRMQQMAGQL-GAFHP 235

  Fly   548 INIPLGQTATSVTTPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTGLGAQQS 612
            ..:||| ...:.||.||     |....|.|.|..|.    |.|:.||..|.|.:.|.:.:.|...
  Rat   236 APLPLG-ACGAYTTAIL-----QHQAALLAAAQGPG----LGQVAAVAAQMQHVAAFSLVAAPLL 290

  Fly   613 SSATDTSAV-----AAAGLLTPMTVQNLAAIAAMT--QP---SLSNAAAAAAAATSPGSAQLTNT 667
            .:|.:||..     |..||..||.|....::...|  ||   ||.|...:...|.|||.|
  Rat   291 PAAANTSPSGNGPGALPGLPAPMGVNGFGSLNPQTNGQPGSDSLYNNGLSPYPAQSPGVA----- 350

  Fly   668 AALLWSDPNPMASAYMSTAAGLPQFGSASALSTSPLASVALSAAAAAAAGKQIEGPEGCNLFIYH 732
                    :|:..||:    |:..:.:|...:.:|: |.|.....:|...:|.||||||||||||
  Rat   351 --------DPLQQAYV----GIHHYAAAYPSAYAPV-STAFPQQPSALPQQQREGPEGCNLFIYH 402

  Fly   733 LPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRL 797
            |||||.|.:|..||||||.|:|||||:|:.|:.||||||||||||.|||.||:||||||:|.|||
  Rat   403 LPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRL 467

  Fly   798 KVQLKKPKD-SKPY 810
            |||||:||| ::||
  Rat   468 KVQLKRPKDANRPY 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru1	NP_001260403.1	RRM1_CELF1_2_Bruno	356..437	CDD:241075	43/80 (54%)
		ELAV_HUD_SF	359..808	CDD:273741	215/460 (47%)
		RRM2_Bruno_like	443..524	CDD:241080	45/81 (56%)
		RRM3_Bruno_like	722..800	CDD:241084	60/77 (78%)
Celf6	XP_008764449.1	RRM1_CELF3_4_5_6	41..127	CDD:410041	47/106 (44%)
		PABP-1234	<48..390	CDD:130689	146/371 (39%)
		RRM2_CELF3_4_5_6	133..213	CDD:410043	44/80 (55%)
		RRM3_CELF3_4_5_6	392..470	CDD:241083	60/77 (78%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1209165at2759
OrthoFinder	1	1.000	-	-		FOG0000286
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X208
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920