DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atilla and crim

DIOPT Version :9

Sequence 1:NP_001260408.1 Gene:atilla / 34647 FlyBaseID:FBgn0032422 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_648500.1 Gene:crim / 39321 FlyBaseID:FBgn0036198 Length:158 Species:Drosophila melanogaster


Alignment Length:166 Identity:39/166 - (23%)
Similarity:62/166 - (37%) Gaps:52/166 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VIFVLLIAVCTMHSASAIKCYQCKSLTDPNCAKDKIDSASNIRAVDC--DSVPKPNTMEQLQPVT 67
            :|..||:| ..:|..|||.||:|.|.| |.||:     ..|.|.:..  :..|:|:.:       
  Fly     7 LIAALLLA-ALIHEGSAIWCYRCTSAT-PGCAE-----KFNWRGIGFLGEHCPEPDDI------- 57

  Fly    68 RCNKVVTSDRAGTIVSRDC----------------------HFESIGQ------KDNECTVTHSR 104
             |.||.....|...::|||                      |.|.:..      |:::....:..
  Fly    58 -CVKVTERRGARETITRDCLSALSFRKDIPADKYEGCRPAAHDEKLANYVNHTIKEHDVRRDYYT 121

  Fly   105 QVESCYTCKGDLCN-ASGAGRFVAVSATALLAILAL 139
            ....|:......|| |||      :..:|::.:|.|
  Fly   122 DTTFCFCFLDHRCNGASG------LQTSAVIGLLTL 151



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR33562
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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