DRSC/TRiP Functional Genomics Resources

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Protein Alignment crok and rtv

DIOPT Version :10

Sequence 1:NP_609557.1 Gene:crok / 34646 FlyBaseID:FBgn0032421 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_572693.1 Gene:rtv / 32056 FlyBaseID:FBgn0261277 Length:151 Species:Drosophila melanogaster


Alignment Length:161 Identity:42/161 - (26%)
Similarity:56/161 - (34%) Gaps:59/161 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILFAIVLCCLLQL-GQAIKCWDCRSDND-PKCGDPFDNSTLAITDCQQAPELEHLKGVRPTMCRK 70
            :|..|.|..|:.: |...:|:.|||..: ..|.|||   |...||.:|.|      ||....|. 
  Fly     7 LLAVIFLISLVSIDGLLRRCYQCRSRGELGSCKDPF---TFNATDVEQEP------GVAAIPCA- 61

  Fly    71 IRQKVHGEWRYFRSCAYMGEPGIEGD------------ERFCLMRTGS----------YN---IF 110
                  ..|     |..:    |||.            :|.|:.|...          ||   ::
  Fly    62 ------SGW-----CGKV----IEGGGTYAIDDYDLAIQRMCVQRGPDDNMDRCADTIYNYKKVY 111

  Fly   111 MEFC---TCNSKDGCNSAG----IHRLGLMG 134
            |.||   .||.....:||.    |..|.|:|
  Fly   112 MCFCQGDLCNGARSWSSAPQMILITMLPLLG 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crokNP_609557.1 TFP_LU_ECD_Crok 22..125 CDD:467121 31/131 (24%)
rtvNP_572693.1 TFP_LU_ECD_Rtv 23..123 CDD:467118 31/124 (25%)

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