DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6583 and F28A12.3

DIOPT Version :9

Sequence 1:NP_609556.2 Gene:CG6583 / 34645 FlyBaseID:FBgn0032420 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_505231.1 Gene:F28A12.3 / 185038 WormBaseID:WBGene00017880 Length:160 Species:Caenorhabditis elegans


Alignment Length:150 Identity:36/150 - (24%)
Similarity:56/150 - (37%) Gaps:40/150 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FLLLTLAICGSWAIRCYQCSSDQDR----------------KGHDSCGAYKRFNRTEHISIECNS 57
            |..|...|..::.::|:||...::.                |.:..|.|      |....:..| 
 Worm    10 FAFLIFLITPTYPLQCHQCGGQENMSKLTKKMFTELNISPDKYYGDCKA------TSGADVCTN- 67

  Fly    58 DESHMPGSFCMKVVQQGPRGF-IWDGRWRQVIRRCASVSD-------TGVVGVCNWGVYENGVYW 114
                  |:||:|..:....|| ..:.:|....:.||||.:       .|...: |..|.:.|...
 Worm    68 ------GTFCIKRAKIHRVGFNSINFKWTSYTKGCASVREDNNQTPSNGCFDL-NQKVKKTGYTT 125

  Fly   115 E--ECYCSSDSCNGSSLVQM 132
            |  :|||..|.||.|:.|.|
 Worm   126 ERLDCYCDKDFCNSSTAVSM 145



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1471810at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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