DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr33a and Gr93b

DIOPT Version :9

Sequence 1:NP_525102.4 Gene:Gr33a / 34641 FlyBaseID:FBgn0032416 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_732664.2 Gene:Gr93b / 117472 FlyBaseID:FBgn0045470 Length:395 Species:Drosophila melanogaster


Alignment Length:447 Identity:81/447 - (18%)
Similarity:149/447 - (33%) Gaps:112/447 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 CNSVCKLSSHLFMHLGAFLYLTITLLSLYRRKEFFQQFDARLNDIDAVIQKCQRVAEMDKVKVTA 125
            |.:|.::|:.|..  ..|||.|           ||.....|:...|:.:....|..         
  Fly    13 CLNVSRISAILLR--SCFLYGT-----------FFGVITFRIERKDSQLVAINRRG--------- 55

  Fly   126 VKHSVAYHFTWLFLF------CVFTFALYYDVRS-----LYL-TFGNLAFIPFMVSSFPYLAGSI 178
                    :.|:.|.      |.:.::  ||..|     :|| .|.....|..::.|...|....
  Fly    56 --------YLWICLVIRLLASCFYGYS--YDAWSGQYEDMYLRAFFGFRLIGCLICSVIILVMQF 110

  Fly   179 IQGEFIYHVSVISQRFEQINMLLEKINQEARHRHAPLT--------VFDIESEGKKERKTVTP-- 233
            ..||.:.:   :..||.|:...::.:....::|.....        ||.:.......|..::|  
  Fly   111 WFGEELIN---LVNRFLQLFRRMQSLTNSPKNRFGDRAEFLLMFSKVFSLLFVFMAFRLMLSPWF 172

  Fly   234 --ITVMDGRTTTGFG--NENKFAGEMKRQEGQQKND-DDDLDTSNDEDEDDFDYDNATIAENTGN 293
              ..|.|..|:.|.|  ....|.|.:  ..|....| ::.:|..........:.:|.:...|...
  Fly   173 LLTLVCDLYTSVGTGMITHLCFVGYL--SIGVLYRDLNNYVDCQLRAQLRSLNGENNSFRNNPQP 235

  Fly   294 TSEA--NLPDLFKLHDKI--------------LALSVITNGEFGPQCVPYMAACFVVSIFGIFLE 342
            |.:|  ||.....|:|:|              |.||:..:          :.|..:||...|...
  Fly   236 TRQAISNLDKCLYLYDEIHQVSRSFQQLFDLPLFLSLAQS----------LLAMSMVSYHAILRR 290

  Fly   343 TKVNFIVGGKSRLLDYMTYLYVIWSFTTMMVAYIVLRLCCNANNHSKQSAMIVHEIMQKKPAFML 407
                             .|.:.:|.....::..:||   ...:.||..:...:...:..:..::.
  Fly   291 -----------------QYSFNLWGLVIKLLIDVVL---LTMSVHSAVNGSRLIRRLSFENFYVT 335

  Fly   408 SNDLFYNKMKSFTLQFLHWEGFFQFNGVGLFALDYTFIFSTVSAATSYLIVLLQFDM 464
            .:..::.|::.|..:..|.|  .:...:|||.:........:||..:||:.|:|:.|
  Fly   336 DSQSYHQKLELFLGRLQHQE--LRVFPLGLFEVSNELTLFFLSAMVTYLVFLVQYGM 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr33aNP_525102.4 7tm_7 <289..465 CDD:303125 35/192 (18%)
Gr93bNP_732664.2 7tm_7 24..391 CDD:285581 77/436 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.