DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-6 and AT1G74140

DIOPT Version :10

Sequence 1:NP_788038.1 Gene:rho-6 / 34640 FlyBaseID:FBgn0032415 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001117599.1 Gene:AT1G74140 / 843754 AraportID:AT1G74140 Length:320 Species:Arabidopsis thaliana


Alignment Length:286 Identity:55/286 - (19%)
Similarity:88/286 - (30%) Gaps:111/286 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAQVESNGASESNNNCVKDVRLL------LLPENSTDSDG----NPASVAFSAESHKKFIDDLTR 56
            |.:|..|..:.|.:...|.|:..      |||...:....    .|::|:.||:.|..|...|..
plant     9 SRKVVVNVGASSQSQLTKMVKKKPNQSRHLLPSRLSSPSSVPHFVPSAVSRSAKVHGFFASKLGN 73

  Fly    57 T---IDVGHVR------------------------RKRLWRVPW--------FILLMSFVQISLH 86
            |   :..|:|.                        :||.|: .|        |.|:::...:...
plant    74 TNLKLKFGNVMESRAGFFSSELPSHGFESGGFTGFQKRGWK-SWINGANGVVFGLVIANAAVFTM 137

  Fly    87 WIASECMQKVLIFKPEWNVEYWRLLTY--------MLLHSDYWHLS-----LNICFQCFIGICLE 138
            |..|:              ..|.|.||        .|:.|.:.|:.     ||:....:.|..:.
plant   138 WRVSD--------------RSWMLSTYSFTSGYIHTLITSGFSHIGTSQIILNMIGISYFGSRIA 188

  Fly   139 VEQGHWRLAVVYMVGGVAGSLA----NAWL----------------QPHLHLMGASAGVYA---- 179
            ...|...|..:|..|.:.||:.    :|.|                .|...|:||...::|    
plant   189 RTLGPLYLLKLYFAGALGGSVCFLSYHALLATLKGEGVVIKDHQSTAPISQLLGADGSMFAIALL 253

  Fly   180 --------------MLGSHVPHLVLN 191
                          ||..||...::|
plant   254 DMFIYPKVTTYFALMLRVHVMFRIIN 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-6NP_788038.1 Rhomboid 106..252 CDD:426384 28/137 (20%)
AT1G74140NP_001117599.1 GlpG 123..319 CDD:440469 32/171 (19%)

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