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Protein Alignment rho-6 and rhbdf1a
DIOPT Version :9
Sequence 1: | NP_788038.1 |
Gene: | rho-6 / 34640 |
FlyBaseID: | FBgn0032415 |
Length: | 263 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005164392.1 |
Gene: | rhbdf1a / 798402 |
ZFINID: | ZDB-GENE-040704-75 |
Length: | 893 |
Species: | Danio rerio |
Alignment Length: | 160 |
Identity: | 40/160 - (25%) |
Similarity: | 72/160 - (45%) |
Gaps: | 13/160 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 92 CMQKVL----IFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQCFIGICLEVEQGHWRLAVVYMV 152
||..|. ...||...:::||...:.||:...|..:::|||..|...||...|..|::::|::
Zfish 672 CMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYIL 736
Fly 153 GGVAGSLANAWLQPHLHLMGASAGVYAMLGSHVPHLVLNFSQLSHRFARIASLLILLLSDVGFTT 217
.|:.|:||:|...|:...:|.:...:.:|......|:.::..|:..:.....||.::|....|..
Zfish 737 SGITGNLASAIFLPYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGL 801
Fly 218 YHFCHNHNRNPRTSLEAHIGGGVAGILCGF 247
..:..|. |||.|.::|....|
Zfish 802 LPWIDNF---------AHISGFISGFFLSF 822
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0705 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1253228at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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