DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment rho-6 and rho-7

DIOPT Version :9

Sequence 1:	NP_788038.1	Gene:	rho-6 / 34640	FlyBaseID:	FBgn0032415	Length:	263	Species:	Drosophila melanogaster
Sequence 2:	NP_001286324.1	Gene:	rho-7 / 36281	FlyBaseID:	FBgn0033672	Length:	351	Species:	Drosophila melanogaster

Alignment Length:	187	Identity:	39/187 - (20%)
Similarity:	62/187 - (33%)	Gaps:	36/187 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    68 LWRVPWFILLMSFVQISLHWIASECMQKVLIFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQCF 132
            :||||      :.....:.:..|....||:.         |.:......|....||..|:.....
  Fly   161 MWRVP------ALKSTMITYFTSNPAAKVVC---------WPMFLSTFSHYSAMHLFANMYVMHS 210

  Fly   133 IGICLEVEQGHWRLAVVYMVGGVAGSLANAWLQPHLHLMGASAGVYAMLGSHVPHLVLNF--SQL 195
            ......|..|..:...||:..||..||.:...:......|.|.|....:.:.:.::...:  :||
  Fly   211 FANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQL 275

  Fly   196 SHRF---------ARIASLLILLLSDVGFTTYHFCHNHNRNPRTSLEAHIGGGVAGI 243
            |..|         |.|..|:.:..:.|......|.|          .||:||.:.||
  Fly   276 SILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDH----------AAHLGGAMFGI 322

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rho-6	NP_788038.1	Rhomboid	106..251	CDD:279958	32/149 (21%)
rho-7	NP_001286324.1	Rhomboid	186..327	CDD:396315	32/147 (22%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45444960
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0705
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.830