Protein Alignment rho-6 and rom-3

DIOPT Version :9

• Sequence 1: NP_788038.1
• Gene: rho-6 / 34640
• FlyBaseID: FBgn0032415
• Length: 263
• Species: Drosophila melanogaster
• Sequence 2: NP_503013.2
• Gene: rom-3 / 191000
• WormBaseID: WBGene00004402
• Length: 861
• Species: Caenorhabditis elegans
• Alignment Length: 248
• Identity: 57/248 - (22%)
• Similarity: 97/248 - (39%)
• Gaps: 67/248 - (27%)

  Fly    26 LPENST-DSDGNPASVAFSA---ESHKKFIDDLTRTIDVGHVRRKRLWRVPWFILLMSFVQISLH 86
            |||:.| ...|.|..:.|..   .:.|::.|                           |||...|
 Worm   518 LPEHLTCQITGRPCCIQFQGLCRIATKEYCD---------------------------FVQGIWH 555

  Fly    87 WIASECMQ---------KVLIFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQCFIGICLEVEQG 142
            ..|:.|.|         .:..|..:...:.:||.|.:.:|:...||:|::.||.:.....|...|
 Worm   556 ENATLCSQVNCFLGICGMIPFFSGDNPNQIYRLFTSLFIHAGVIHLALSMAFQMYFMAYQENLIG 620

  Fly   143 HWRLAVVYMVGGVAGSLANAWLQPHLHLMGASAGVYAMLGS------HVPHLV----LNFSQLSH 197
            ..|:|::|...|::|:||:|...|:...:|.|:....:..|      |..||:    |.|..::|
 Worm   621 SKRMAILYFASGISGNLASAIFVPYYPTVGPSSAQCGVFSSVVVELWHFRHLLDPFELKFQSIAH 685

  Fly   198 RFARIASLLILLLSDVGFTTYHFCHNHNRNPRTSLEAHIGGGVAGILCGFIVY 250
               .|.:||:|.:..:              |.....:|:.|.:.|::...|||
 Worm   686 ---LIVTLLVLCIGLI--------------PWIDNWSHLFGTIFGLITSIIVY 721

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho-6	NP_788038.1	Rhomboid	106..251	CDD:279958	40/155 (26%)
rom-3	NP_503013.2	Rhomboid	582..725	CDD:366759	40/157 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0705
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S5508
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1253228at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.770