Protein Alignment rho-6 and rom-1

DIOPT Version :10

• Sequence 1: NP_788038.1
• Gene: rho-6 / 34640
• FlyBaseID: FBgn0032415
• Length: 263
• Species: Drosophila melanogaster
• Sequence 2: NP_498029.2
• Gene: rom-1 / 184989
• WormBaseID: WBGene00004400
• Length: 356
• Species: Caenorhabditis elegans
• Alignment Length: 297
• Identity: 78/297 - (26%)
• Similarity: 144/297 - (48%)
• Gaps: 40/297 - (13%)

  Fly     1 MSAQVESNGASESNN--NCVKDVRLLLLPENSTDSDGNPASVAFSAESH---KKFIDDL------ 54
            :::::|:.....:|.  :.:|:.     |:...|.||....|...|...   |:.:.|:
 Worm    32 LASRIETRKIPLTNGQIHAIKEA-----PDELVDIDGFQKIVTSKAAQRSTIKRIMYDMADPIMS 91

  Fly    55 -TRTIDVGHVRRKRLW-RVPWFILLMSFVQISL---HW-------IASEC----------MQKVL 97
             ::.|:|........| ..|.|:||::.:|:.:   :|       |.::|          ...:.
 Worm    92 DSQKIEVHSYIDSYSWCPPPIFMLLITIIQVGIFFFYWESDGGRSIWTDCAGCFVHHNHTAPGIF 156

  Fly    98 IFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQCFIGICLEVEQGHWRLAVVYMVGGVAGSLANA 162
            ||.|:...|.||..:||.||:...||..|:..|..:||.|||....||:..:|::...:|||...
 Worm   157 IFAPKLRGEAWRFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSGSLLQY 221

  Fly   163 WLQPHLHLMGASAGVYAMLGSHVPHLVLNFSQLSHRFARIASLLILLLSDVGFTTYHFCHNHNRN 227
            .:.|:..|:||||||||::.:||.:::||:.::..|:.|:..|.:.:..|.|...:...:.::.:
 Worm   222 AIDPNSLLVGASAGVYALIFAHVANVILNWHEMPLRWIRVLVLFVFIFLDFGGAIHRRFYTNDCD 286

  Fly   228 PRTSLEAHIGGGVAGILCGFIV-YRRLQPANQKAIYF 263
            ..:.| |||.|.|.|:..|::| |..::...:|.|.:
 Worm   287 SVSHL-AHIAGAVTGLFFGYVVLYNVVEHRIEKIIRY 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho-6	NP_788038.1	Rhomboid	106..252	CDD:426384	51/146 (35%)
rom-1	NP_498029.2	Rhomboid	160..309	CDD:426384	51/149 (34%)