DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rho-6 and RHBDL3

DIOPT Version :10

Sequence 1:NP_788038.1 Gene:rho-6 / 34640 FlyBaseID:FBgn0032415 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001350764.1 Gene:RHBDL3 / 162494 HGNCID:16502 Length:428 Species:Homo sapiens


Alignment Length:258 Identity:60/258 - (23%)
Similarity:93/258 - (36%) Gaps:82/258 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DDLTRTIDVGHVRRKRLWRV--------PWFILLMSFVQIS-------------LHWIASECMQK 95
            :.|.|.||       |.|..        |||::.::.::::             |.......::.
Human   142 ETLPREID-------RKWYYDSYTCCPPPWFMITVTLLEVAFFLYNGVSLGQFVLQVTHPRYLKN 199

  Fly    96 VLIFKPEWNVEYWRLLTYMLLHSDYWHLSLNICFQCFIGICLEVEQGHWRLAVVYMVGGVAG--- 157
            .|::.|:...:.||.|||:.:|:...||.||:..|..:|:.||:..|..|:.:||:.|.||.   
Human   200 SLVYHPQLRAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAELVR 264

  Fly   158 -----SLANAWLQPHLHLMGASAGVYAMLGSHVPHLVLNFSQLSHRFARIASLLILLLSDVGFTT 217
                 ..|.....|:|:..|..||                        |:|.|..:.||.|  .:
Human   265 HEVPVQAAADGCGPYLYEHGVWAG------------------------RVAPLPPVGLSPV--PS 303

  Fly   218 YHFC---------HNHNRNPRTSLEAHIGGGVAGI-LCGFIVYRR----------LQPANQKA 260
            ...|         |:..|.....|.|...|.|..: .||.:...|          |.||..||
Human   304 PKLCGALGWRGRGHHPGRGGPEELRAEAPGPVTVVDFCGHVHRLRAVRCLLEHLCLHPAGLKA 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-6NP_788038.1 Rhomboid 106..252 CDD:426384 42/163 (26%)
RHBDL3NP_001350764.1 EF-hand_7 36..100 CDD:463900
Rhomboid 205..>260 CDD:451297 20/54 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.