DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phae2 and Tmprss4

DIOPT Version :10

Sequence 1:NP_609551.2 Gene:Phae2 / 34638 FlyBaseID:FBgn0263235 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:254 Identity:82/254 - (32%)
Similarity:123/254 - (48%) Gaps:27/254 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 CVSQGSGLALDQPEGRVVGGKAAAANSAPYIVSMQYGGTHYCAANIINSNWLVTAAHCLANRNQV 80
            |:..|..|...    |||||..|:|:|.|:.||:||...|.|..:|::.:|::|||||......|
  Rat   234 CLDCGKSLKTT----RVVGGVEASADSWPWQVSIQYNKQHVCGGSILDHHWILTAAHCFRKYLDV 294

  Fly    81 LGSTLVAGSIAVAGTASTTQKRQITHYVINDLYTGGTVPY-----DIGLIYTPTAFTWTAAVAPV 140
            ....:.|||..:..:.|..         :..::.....|.     ||.|:......|::.:|.|:
  Rat   295 SSWKVRAGSNKLGNSPSLP---------VAKIFIAEPNPLQPKEKDIALVKLKMPLTFSGSVRPI 350

  Fly   141 KLPSSG--VRPTGKADLFGWGSTSKTNSPSYPKTLQEAKNIPIISLDSCAAALGSKGQDVHTTNL 203
            .||.|.  :.||....:.|||.|.: |......||.:| ::.:|....|.|....:| :|....|
  Rat   351 CLPFSDEELIPTMPVWVIGWGFTEE-NGGKMSDTLLQA-SVQVIDSARCNAEDAYQG-EVTAGML 412

  Fly   204 CTGPLTGGTSFCTSDSGGPLVQGN---VLIGIVSWGKLPCGQPNSPSVYVQVSSFITWI 259
            |.|...||...|..||||||:...   .::|||||| ..||.|::|.||.:|::::.||
  Rat   413 CAGTPQGGKDTCQGDSGGPLMYHYDKWQVVGIVSWG-YGCGSPSTPGVYTKVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phae2NP_609551.2 Tryp_SPc 32..262 CDD:238113 78/238 (33%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 1/3 (33%)
Tryp_SPc 245..470 CDD:214473 77/237 (32%)
Blue background indicates that the domain is not in the aligned region.

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