DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phae2 and LOC100005420

DIOPT Version :9

Sequence 1:NP_001285871.1 Gene:Phae2 / 34638 FlyBaseID:FBgn0263235 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_021332645.1 Gene:LOC100005420 / 100005420 -ID:- Length:798 Species:Danio rerio


Alignment Length:280 Identity:73/280 - (26%)
Similarity:122/280 - (43%) Gaps:46/280 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VCVSQGSGLALDQP--------------------------EGRVVGGKAAAANSAPYIVSMQYGG 53
            ||   |.|..|.:|                          ..|:|||..|.....|:..|:|..|
Zfish   524 VC---GDGTCLKKPNPECDFITDCPDESDEKHCDCGLRPFSSRIVGGADAVEGEWPWQASLQIRG 585

  Fly    54 THYCAANIINSNWLVTAAHCL-ANRNQVLGSTLVAGSIAVAGTASTTQKRQITHYVINDLYTGGT 117
            .|.|...::::.|:|:||||. .:|......|:..|.:.::.:..:.:...::...::..|...|
Zfish   586 RHICGGALVSAQWVVSAAHCFHDDRYSPSVWTVYLGKLRLSSSGQSEEAVGVSLIHLHHYYDDET 650

  Fly   118 VPYDIGLIYTPTAFTWTAAVA-PVKLP--SSGVRPTGKADLFGWGSTSKTNSPSYPKTLQEAKNI 179
            ..||:.|:..... .|...:| ||.:|  :..:.|.....:.|||:..:..:.|  ..||:. ::
Zfish   651 HDYDVALLRLARP-VWAGTLAQPVCVPPVTHQLEPELLCWVTGWGALREGGAVS--DVLQKV-DV 711

  Fly   180 PIISLDSCAAALGSKGQDVHTTNLCTGPLTGGTSFCTSDSGGPLV----QGN-VLIGIVSWGKLP 239
            .::|.|:|   :.|.|..:....:|.|..:||...|..|||||||    .|. .|.|:||||: .
Zfish   712 RLVSEDAC---VRSYGYLISPRMICAGYRSGGKDACQGDSGGPLVCQEPSGRWFLAGVVSWGR-G 772

  Fly   240 CGQPNSPSVYVQVSSFITWI 259
            ||:.:...||.:::....||
Zfish   773 CGRADYYGVYTRITKLSVWI 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phae2NP_001285871.1 Tryp_SPc 31..259 CDD:214473 65/236 (28%)
Tryp_SPc 32..262 CDD:238113 66/237 (28%)
LOC100005420XP_021332645.1 SEA 76..169 CDD:307516
LDLa 446..476 CDD:238060
LDLa 481..512 CDD:238060
LDLa 518..553 CDD:238060 6/31 (19%)
Tryp_SPc 564..794 CDD:238113 66/237 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.