DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phae1 and st14

DIOPT Version :9

Sequence 1:NP_001285870.1 Gene:Phae1 / 34637 FlyBaseID:FBgn0263234 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_012821897.2 Gene:st14 / 448647 XenbaseID:XB-GENE-1008784 Length:845 Species:Xenopus tropicalis


Alignment Length:245 Identity:71/245 - (28%)
Similarity:112/245 - (45%) Gaps:21/245 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EGRVVGGSPAAVNSAPYAVSMQY-GGTHYCAASILNANWLVTAAHCLTN--SNQVLGSTLVAGSI 94
            :.|:|||..|.....|:.||:.. |..|.|.||:::...|::||||..:  |.:...::|....:
 Frog   602 KSRIVGGVNADTGEFPWQVSLHVKGNKHTCGASLVSPTMLISAAHCFQDDQSMRYSDASLWTAYL 666

  Fly    95 AVDGTASTTQ----TRSITYFVINDLYTGGTVPYDIGMIYTPTAFVWSAAVAPVTLP-SSGVVPT 154
            .:...|....    .|.|...:.:..:...|...||.::.......::..:.|:.:| |:...|.
 Frog   667 GLHDQAQLNSKDVVERKIKRIMAHIGFNDNTYDNDISVLELEKPVDYTDFIQPICIPESTHDFPV 731

  Fly   155 GTAN-LYGWGSTSTTNTASYPSTLQVATNVPIISLSSCESALGTKGSDVHSTNLCTGPLTGGVSI 218
            |... :.|||:......|:.  .||.| .:.||:.:.|...|   ...:....||.|.::||:..
 Frog   732 GKPIWVTGWGALKEGGGAAV--ILQKA-EIRIINQTECNKLL---DGQLTPRMLCAGFVSGGIDA 790

  Fly   219 CTSDSGGPL--VQGN---VLIGIVSWGKLPCGQANSPSVYVQVSSFISWI 263
            |..||||||  |:.|   .|.||||||: .|.:.|.|.||.:|:....||
 Frog   791 CQGDSGGPLSSVELNNKVYLAGIVSWGE-GCARRNKPGVYTRVAMMRDWI 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phae1NP_001285870.1 Tryp_SPc 35..263 CDD:214473 69/241 (29%)
Tryp_SPc 36..266 CDD:238113 70/242 (29%)
st14XP_012821897.2 SEA 76..167 CDD:396113
CUB 216..320 CDD:238001
CUB 328..432 CDD:238001
LDLa 442..474 CDD:238060
LDLa 476..511 CDD:238060
LDLa 513..547 CDD:238060
LDLa 554..587 CDD:197566
Tryp_SPc 604..839 CDD:214473 69/241 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.