DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phae1 and F12

DIOPT Version :9

Sequence 1:NP_001285870.1 Gene:Phae1 / 34637 FlyBaseID:FBgn0263234 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:247 Identity:83/247 - (33%)
Similarity:119/247 - (48%) Gaps:28/247 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RVVGGSPAAVNSAPYAVSMQYGGTHYCAASILNANWLVTAAHCLTNSNQVLGSTLVAGSIAVDGT 99
            |||||..|...|.||..:: |.|..:||.|:::..|::||||||.........|:|.|....:.:
  Rat   361 RVVGGLVALPGSHPYIAAL-YWGDSFCAGSLIDPCWVLTAAHCLQKRPAPEELTVVLGQDRHNQS 424

  Fly   100 ASTTQTRSITYFVINDLYTGGTVPYDIGMI----YTPTAFVWSAAVAPVTLPSSGVVPTGT--AN 158
            ....||.::..:.:::.::..|..:|:.::    ...:..:.|..|.||.||||...|:.|  ..
  Rat   425 CERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCLPSSAAPPSETVLCE 489

  Fly   159 LYGWGSTSTTNTASYPSTLQVATNVPIISLSSCESALGTKGSDVHST-----NLCTGPLTGGVSI 218
            :.|||. .......|.:.||.| .||.|||..|.|      |:||..     .||.|.|.||...
  Rat   490 VAGWGH-QFEGAEEYATFLQEA-QVPFISLDRCSS------SNVHGDAILPGMLCAGFLEGGADA 546

  Fly   219 CTSDSGGPLV-------QGNVLIGIVSWGKLPCGQANSPSVYVQVSSFISWI 263
            |..|||||||       :...|.|::|||. .||..|.|.||..|::::.||
  Rat   547 CQGDSGGPLVCDEGVTERQLTLRGVISWGS-GCGDRNKPGVYTDVANYLDWI 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phae1NP_001285870.1 Tryp_SPc 35..263 CDD:214473 81/245 (33%)
Tryp_SPc 36..266 CDD:238113 82/246 (33%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:278437
Kringle 216..294 CDD:278480
Tryp_SPc 361..597 CDD:214473 81/245 (33%)
Tryp_SPc 362..600 CDD:238113 82/246 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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