DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phae1 and St14

DIOPT Version :9

Sequence 1:NP_001285870.1 Gene:Phae1 / 34637 FlyBaseID:FBgn0263234 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:245 Identity:76/245 - (31%)
Similarity:116/245 - (47%) Gaps:21/245 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EGRVVGGSPAAVNSAPYAVSMQ-YGGTHYCAASILNANWLVTAAHCLTN------SNQVLGSTLV 90
            :.|||||:.|.....|:.||:. .|..|.|.||:::.:|||:||||..:      |:..:.:..:
  Rat   612 QARVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDWLVSAAHCFQDETIFKYSDHTMWTAFL 676

  Fly    91 AGSIAVDGTASTTQTRSITYFVINDLYTGGTVPYDIGMIYTPTAFVWSAAVAPVTLP-SSGVVPT 154
            ........:||..|...:...:.:..:...|..|||.::.......:|..|.|:.|| ::.|.|.
  Rat   677 GLLDQSKRSASGVQEHKLKRIITHPSFNDFTFDYDIALLELEKPAEYSTVVRPICLPDNTHVFPA 741

  Fly   155 GTAN-LYGWGSTSTTNTASYPSTLQVATNVPIISLSSCESALGTKGSDVHSTNLCTGPLTGGVSI 218
            |.|. :.|||.|....|.:.  .||.. .:.:|:.::||..|   ...:....:|.|.|:|||..
  Rat   742 GKAIWVTGWGHTKEGGTGAL--ILQKG-EIRVINQTTCEELL---PQQITPRMMCVGFLSGGVDS 800

  Fly   219 CTSDSGGPL----VQGNVL-IGIVSWGKLPCGQANSPSVYVQVSSFISWI 263
            |..||||||    ..|.:. .|:||||: .|.|.|.|.||.::.....||
  Rat   801 CQGDSGGPLSSVEKDGRIFQAGVVSWGE-GCAQRNKPGVYTRIPEVRDWI 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phae1NP_001285870.1 Tryp_SPc 35..263 CDD:214473 74/241 (31%)
Tryp_SPc 36..266 CDD:238113 75/242 (31%)
St14NP_446087.1 SEA 88..178 CDD:396113
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 75/242 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.