DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phae1 and si:ch73-182e20.4

DIOPT Version :9

Sequence 1:NP_001285870.1 Gene:Phae1 / 34637 FlyBaseID:FBgn0263234 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_009296334.2 Gene:si:ch73-182e20.4 / 100535157 ZFINID:ZDB-GENE-131127-155 Length:341 Species:Danio rerio


Alignment Length:281 Identity:78/281 - (27%)
Similarity:125/281 - (44%) Gaps:36/281 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SGLLLLLGIC----RISGVAI-GAP----EGRVVGGSPAAVNSAPYAVSMQYGGTHYCAASILNA 68
            :.:.|||.:|    .:|.:.: |.|    ..|:|||..:...:.|:.||::|.|.|.|..|::|.
Zfish    39 TSVTLLLLMCVRADSLSNLQVCGRPNPQLNPRIVGGLNSTEGAWPWMVSLRYYGNHICGGSLINN 103

  Fly    69 NWLVTAAHC--LTNSNQVLGSTLVAGSIAVDGTASTTQTRSITYFVINDLYTGGTVPYDIGMIYT 131
            .|::|||||  ||.||.:    :..|............||:::..:.:..|...|...||.::..
Zfish   104 EWVLTAAHCVNLTRSNML----VYLGKWRRYAADVNEITRTVSNIIPHPSYNSTTYDNDIALLQL 164

  Fly   132 PTAFVWSAAVAPVTL-PSSGVVPTGTAN-LYGWGSTSTTNTASYPSTLQVATNVP---------- 184
            .:...:|..:.||.| ......|.||.: ..|||....:..........|:..:|          
Zfish   165 SSTVHYSDYIKPVCLADEQSNFPPGTRSWATGWGRIGVSGKGGIRGRTTVSVPLPPPGILQEVKL 229

  Fly   185 -IISLSSCESALGTKGSDVHSTNLCTGPLTGGVSICTSDSGGPLVQGN----VLIGIVSWGKLPC 244
             :.|.:.|.|....:   ::...:|.|..:||.:..:.|||||||...    |..|:||.| ..|
Zfish   230 KVYSNADCNSICHGR---INPNMICAGTRSGGKATFSGDSGGPLVSKQCSVWVQAGVVSHG-YGC 290

  Fly   245 GQANSPSVYVQVSSFISWISA 265
            .|.|.|.|:::||.:..||:|
Zfish   291 AQPNLPEVFIRVSEYKQWITA 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phae1NP_001285870.1 Tryp_SPc 35..263 CDD:214473 68/246 (28%)
Tryp_SPc 36..266 CDD:238113 70/249 (28%)
si:ch73-182e20.4XP_009296334.2 Tryp_SPc 71..309 CDD:238113 67/245 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.