Protein Alignment Rab6 and Rab36

DIOPT Version :9

• Sequence 1: NP_001285869.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001346199.1
• Gene: Rab36 / 76877
• MGIID: 1924127
• Length: 267
• Species: Mus musculus
• Alignment Length: 220
• Identity: 78/220 - (35%)
• Similarity: 111/220 - (50%)
• Gaps: 17/220 - (7%)

  Fly     2 SSGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 66
            ::|..|  ||..|:|.:|:..|||||||.|...:.||:.|:||||:||..:...:......||:|
Mouse    49 NTGTAG--LRLSKVVVVGDLYVGKTSLIHRLCKNVFDHDYKATIGVDFEIERFEIAGIPYSLQIW 111

  Fly    67 DTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDV-RTERGSDVIIMLVGNKTDLS 130
            ||||||:|:.:..:|.|.:.|.:..:|:|:..:...|.:|::|| |........|.|||.|.||.
Mouse   112 DTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDVLRENEAGSCFIFLVGTKKDLL 176

  Fly   131 DKRQVSTEEGE--RKAKELNVMFIETSAKAGYNVKQLFRRVAAAL---PGMDSTENKPSEDMQ-- 188
            ........|.|  ..|.|:...:...|||.|.|||..|.||||..   ..:...|.:||...|
Mouse   177 SGAACEQAEAEAVHLANEMQAEYWSVSAKTGENVKAFFSRVAALAFEQSVLQDLEKRPSTQSQVG 241

  Fly   189 ----EVVLKDSP--NETKDPEG-GC 206
                :::..:.|  .|.|.|.| ||
Mouse   242 DGDGDLIRIEVPKTQENKRPPGLGC 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_001285869.1	Rab6	13..173	CDD:206654	63/162 (39%)
Rab36	NP_001346199.1	P-loop_NTPase	58..223	CDD:393306	63/164 (38%)
		Effector region. /evidence=ECO:0000250	86..94		5/7 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0094
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810