DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab6 and rab39ba

DIOPT Version :10

Sequence 1:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_001092211.1 Gene:rab39ba / 562596 ZFINID:ZDB-GENE-070620-7 Length:213 Species:Danio rerio


Alignment Length:159 Identity:62/159 - (38%)
Similarity:104/159 - (65%) Gaps:2/159 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLE-DRTVRLQLWDTAGQER 73
            |.:|:|:.:|:.:|||:.||.||....|......|:|:||.|:.:.:| .:.::||:||||||||
Zfish     6 LYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQER 70

  Fly    74 FRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTE-RGSDVIIMLVGNKTDLSDKRQVST 137
            |||:..:|.|:|...::::||||..||....:|:::.|:. :...::.:|||:|.||..:||||.
Zfish    71 FRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFILVGHKCDLEQQRQVSQ 135

  Fly   138 EEGERKAKELNVMFIETSAKAGYNVKQLF 166
            :|.|:.|....:.::||||:...||::.|
Zfish   136 QEAEKLAAAYGMRYVETSARDAINVEKAF 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab6NP_477172.1 Rab6 13..173 CDD:206654 61/156 (39%)
rab39baNP_001092211.1 Rab39 7..213 CDD:133311 61/158 (39%)

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