Protein Alignment Rab6 and rab11a

DIOPT Version :10

• Sequence 1: NP_477172.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001007360.1
• Gene: rab11a / 492487
• ZFINID: ZDB-GENE-041114-53
• Length: 215
• Species: Danio rerio
• Alignment Length: 201
• Identity: 69/201 - (34%)
• Similarity: 121/201 - (60%)
• Gaps: 8/201 - (3%)

  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77
            ||:|.:|:..|||::|::||..:.|:...::|||::|.::::.::.:||:.|:||||||||:|::
Zfish    12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRAI 76

  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142
            ..:|.|.:..|::||||....::....:|:.::|....|:::|||||||:||...|.|.|:|...
Zfish    77 TSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARA 141

  Fly   143 KAKELNVMFIETSAKAGYNVKQLFR-------RVAAALPGMDSTENKPSEDMQEVVLKDSPNETK 200
            .|::..:.|:||||....||:..|:       |:.:.....|..:|..|.....|.::..|.|.|
Zfish   142 FAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSDRRDNDMSPSNNVVSIQVQPTENK 206

  Fly   201 DPEGGC 206
             |:..|
Zfish   207 -PKMQC 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_477172.1	Rab6	13..173	CDD:206654	60/166 (36%)
rab11a	NP_001007360.1	Rab11_like	9..173	CDD:206660	59/160 (37%)