Protein Alignment Rab6 and rab3aa

DIOPT Version :10

• Sequence 1: NP_477172.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001003419.1
• Gene: rab3aa / 445024
• ZFINID: ZDB-GENE-040801-2
• Length: 220
• Species: Danio rerio
• Alignment Length: 199
• Identity: 77/199 - (38%)
• Similarity: 118/199 - (59%)
• Gaps: 4/199 - (2%)

  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77
            ||::.:|..||||||.:.|:..|||...:.:|:||||..||:|..|:.::||:||||||||:|::
Zfish    23 FKVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTI 87

  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142
            ..:|.|.:...:::|||||.:||:....|...::|....:..::|||||.|:.|:|.|:.:.|.:
Zfish    88 TTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVAGQRGRQ 152

  Fly   143 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDMQEVVLKDSPNETKDPEGG-- 205
            .:::|...|.|.|||...||||.|.|:...:....| ||..|.|......|..|..::.|:..
Zfish   153 LSEQLGFEFFEASAKDNINVKQTFERLVDVICERMS-ENLESADPSMTGNKLGPELSEQPQRSHK 216

  Fly   206 -CAC 208
             |||
Zfish   217 DCAC 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_477172.1	Rab6	13..173	CDD:206654	66/159 (42%)
rab3aa	NP_001003419.1	Rab3	22..186	CDD:206657	66/162 (41%)