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Protein Alignment Rab6 and Rab30
DIOPT Version :9
Sequence 1: | NP_001285869.1 |
Gene: | Rab6 / 34636 |
FlyBaseID: | FBgn0015797 |
Length: | 208 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001245926.1 |
Gene: | Rab30 / 33988 |
FlyBaseID: | FBgn0031882 |
Length: | 223 |
Species: | Drosophila melanogaster |
Alignment Length: | 172 |
Identity: | 74/172 - (43%) |
Similarity: | 109/172 - (63%) |
Gaps: | 1/172 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77
||:|.:|...||||.|:.||....|.....||||:||:.||:.:|...::||:|||||||||||:
Fly 8 FKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSI 72
Fly 78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142
..||.|.:...::||||:...:|.....|:.:::....|.|:.:||||||| .|.|::.|:.||.
Fly 73 TQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPTQIGEE 136
Fly 143 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPS 184
.||:.::.|:|||||...||::||..:||.|.|...:::..|
Fly 137 FAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSS 178
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rab6 | NP_001285869.1 |
Rab6 |
13..173 |
CDD:206654 |
71/159 (45%) |
Rab30 | NP_001245926.1 |
Rab30 |
1..168 |
CDD:133314 |
71/160 (44%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45454191 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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