DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab6 and Rab9D

DIOPT Version :9

Sequence 1:NP_001285869.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster


Alignment Length:167 Identity:63/167 - (37%)
Similarity:98/167 - (58%) Gaps:5/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLED-RTVR-LQLWDT 68
            :.||   ||::.||:..||||.|:.||..:.|...:::|:|:|....::...| |..| ||:|||
  Fly     4 YDNP---FKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDT 65

  Fly    69 AGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKR 133
            :..|||:.|..:..|.:...::|||||::.||.....|:.::|......||::|||||:|..:.|
  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHR 130

  Fly   134 QVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 170
            |||..:|...|...::.|.|.|||:|.||..:|..:|
  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab6NP_001285869.1 Rab6 13..173 CDD:206654 61/160 (38%)
Rab9DNP_727432.1 RAB 8..171 CDD:197555 61/160 (38%)
Rab 8..167 CDD:206640 60/158 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454168
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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