Protein Alignment Rab6 and Rab6a

DIOPT Version :9

• Sequence 1: NP_001285869.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001157135.1
• Gene: Rab6a / 19346
• MGIID: 894313
• Length: 208
• Species: Mus musculus
• Alignment Length: 207
• Identity: 178/207 - (85%)
• Similarity: 190/207 - (91%)
• Gaps: 1/207 - (0%)

  Fly     2 SSGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 66
            :.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||
Mouse     3 AGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 67

  Fly    67 DTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 131
            |||||||||||||||||||..|||||||||.|||.||:|||||||||||||||||||||||||:|
Mouse    68 DTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 132

  Fly   132 KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDMQEVVLKDSP 196
            |||||.|||||||||||||||||||||||||||||||||||||||:||:::..|||.::.| :.|
Mouse   133 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKL-EKP 196

  Fly   197 NETKDPEGGCAC 208
            .|....||||:|
Mouse   197 QEQPVNEGGCSC 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_001285869.1	Rab6	13..173	CDD:206654	151/159 (95%)
Rab6a	NP_001157135.1	Rab6	14..174	CDD:206654	151/159 (95%)
		Effector region. /evidence=ECO:0000250	42..50		7/7 (100%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167850121
Domainoid	1	1.000	303	1.000	Domainoid score	I1394
eggNOG	1	0.900	-	-		E1_KOG0094
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	359	1.000	Inparanoid score	I2201
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000767
OrthoInspector	1	1.000	-	-		otm44161
orthoMCL	1	0.900	-	-		OOG6_100976
Panther	1	1.100	-	-	LDO	PTHR24073
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1276
SonicParanoid	1	1.000	-	-		X452
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.780