Protein Alignment Rab6 and rab-6.1

DIOPT Version :9

• Sequence 1: NP_001285869.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_498993.1
• Gene: rab-6.1 / 176275
• WormBaseID: WBGene00004269
• Length: 205
• Species: Caenorhabditis elegans
• Alignment Length: 208
• Identity: 158/208 - (75%)
• Similarity: 183/208 - (87%)
• Gaps: 9/208 - (4%)

  Fly     5 DF-GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 68
            || .|.|:||||||||||||||||:||||||||||||||||||||||||||||||||:|||||||
 Worm     3 DFTNNALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDT 67

  Fly    69 AGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKR 133
            |||||||||||||||||:||||||||||.||||||:||:||||.|||.||||:||||||||:|||
 Worm    68 AGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKR 132

  Fly   134 QVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGM--DSTENKPSEDMQEVVLKDSP 196
            |||||:||:||::|||||||||||||||||||||::|.||||:  :.|..:|:     :|:.:.|
 Worm   133 QVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPN-----IVIMNPP 192

  Fly   197 NETKDPEG-GCAC 208
            .:.::.:| .|.|
 Worm   193 KDAEESQGRQCPC 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_001285869.1	Rab6	13..173	CDD:206654	142/159 (89%)
rab-6.1	NP_498993.1	Rab6	12..172	CDD:206654	142/159 (89%)
		RAB	12..170	CDD:197555	141/157 (90%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160167284
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0094
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53521
OrthoDB	1	1.010	-	-		D1277051at2759
OrthoFinder	1	1.000	-	-		FOG0000767
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100976
Panther	1	1.100	-	-	LDO	PTHR24073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X452
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	8.760