Protein Alignment Rab6 and rab-5

DIOPT Version :10

• Sequence 1: NP_477172.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_492481.1
• Gene: rab-5 / 172755
• WormBaseID: WBGene00004268
• Length: 208
• Species: Caenorhabditis elegans
• Alignment Length: 205
• Identity: 81/205 - (39%)
• Similarity: 123/205 - (60%)
• Gaps: 12/205 - (5%)

  Fly     7 GNPLR--KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 69
            |.|.|  :||||.|||.:|||:||:.||:...|....::|||..||::|:.|:|.|::.::||||
 Worm    12 GGPNRTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTA 76

  Fly    70 GQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQ 134
            ||||:.||.|.|.|.:..|:|||||||..||.:...|:.:::.:...::::.|.|||.|:::||.
 Worm    77 GQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRT 141

  Fly   135 VSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP-GMDSTENKPSEDMQEVVLKDSPNE 198
            |..||....|::..::|:|||||...||..:|..:|..|| |....|...:.||         |:
 Worm   142 VEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLPIGPAQGEPTGTVDM---------NQ 197

  Fly   199 TKDPEGGCAC 208
            .:..:.|..|
 Worm   198 PQQQQKGSCC 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_477172.1	Rab6	13..173	CDD:206654	69/159 (43%)
rab-5	NP_492481.1	Rab5_related	19..181	CDD:206653	69/161 (43%)