Protein Alignment Rab6 and Rab3d

DIOPT Version :10

• Sequence 1: NP_477172.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: XP_006242655.1
• Gene: Rab3d / 140665
• RGDID: 620924
• Length: 239
• Species: Rattus norvegicus
• Alignment Length: 206
• Identity: 80/206 - (38%)
• Similarity: 118/206 - (57%)
• Gaps: 19/206 - (9%)

  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77
            |||:.:|..||||||.:.|:..|||...:.:|:||||..||:|..|:.::||:||||||||:|::
  Rat    43 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTI 107

  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142
            ..:|.|.:...:::|||.|..||.....|...::|....:..::|||||.||.|:|.||.|:|:|
  Rat   108 TTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQR 172

  Fly   143 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDMQEVVLKDSP---------NE 198
            .|.:|...|.|.|||...||||:|.|:      :|...:|.:|.::.   ..||         .:
  Rat   173 LAGDLGFEFFEASAKENINVKQVFERL------VDIICDKMNESLEP---SSSPGSNGKGPALGD 228

  Fly   199 TKDPE-GGCAC 208
            |..|: ..|.|
  Rat   229 TPPPQPSSCGC 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_477172.1	Rab6	13..173	CDD:206654	71/159 (45%)
Rab3d	XP_006242655.1	Rab3	42..206	CDD:206657	72/168 (43%)