DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab6 and Rab11

DIOPT Version :10

Sequence 1:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster
Sequence 2:XP_001238827.3 Gene:Rab11 / 1274700 VectorBaseID:AGAMI1_005458 Length:215 Species:Anopheles gambiae


Alignment Length:200 Identity:63/200 - (31%)
Similarity:117/200 - (58%) Gaps:19/200 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77
            ||:|.:|:..|||::|::||..:.|:...::|||::|.::::.::.:|::.|:||||||||:|::
Mosquito    12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAI 76

  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142
            ..:|.|.:..|::||||....::....:|:.::|.....:::|||||||:||...|.|.|:|.:.
Mosquito    77 TSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKG 141

  Fly   143 KAKELNVMFIETSAKAGYNVKQLFRRVAAAL-------------------PGMDSTENKPSEDMQ 188
            .|:...:.||||||....||:..|:.:...:                   |.:::.:.||:....
Mosquito   142 FAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGSVIRPNLENIDVKPTNPTT 206

  Fly   189 EVVLK 193
            :.|.|
Mosquito   207 DSVRK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab6NP_477172.1 Rab6 13..173 CDD:206654 58/159 (36%)
Rab11XP_001238827.3 Rab11_like 9..173 CDD:206660 58/160 (36%)

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