DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab6 and Rab10

DIOPT Version :10

Sequence 1:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster
Sequence 2:XP_061498908.1 Gene:Rab10 / 1272433 VectorBaseID:AGAMI1_013648 Length:204 Species:Anopheles gambiae


Alignment Length:190 Identity:81/190 - (42%)
Similarity:119/190 - (62%) Gaps:9/190 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77
            |||:.:|:..||||.::.||..|:|.:|:.:||||||..||:.|..:.::||:|||||||||.::
Mosquito    10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQIWDTAGQERFHTI 74

  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142
            ..||.|.:...::||||||..||....||:.::......||..|::|||.|::|||.|..|.||.
Mosquito    75 TTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMILGNKCDMADKRAVRKERGEN 139

  Fly   143 KAKELNVMFIETSAKAGYNVKQLFRRVAAAL----PGMDSTENKPSEDMQEVVLKDSPNE 198
            .|:|.::.|:||||||..|::..||.:|.|:    .|.::|:|.     ..||:..|..|
Mosquito   140 IAREHDIRFMETSAKANTNIELAFRELAEAILDKVAGKETTDNP-----DRVVVNRSTGE 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab6NP_477172.1 Rab6 13..173 CDD:206654 73/159 (46%)
Rab10XP_061498908.1 None

Return to query results.
Submit another query.