Protein Alignment Rab6 and rab41

DIOPT Version :9

• Sequence 1: NP_001285869.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: XP_012823317.1
• Gene: rab41 / 100124772
• -ID: -
• Length: 211
• Species: Xenopus tropicalis
• Alignment Length: 212
• Identity: 179/212 - (84%)
• Similarity: 191/212 - (90%)
• Gaps: 5/212 - (2%)

  Fly     1 MSS---GDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-V 61
            |||   |:||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
 Frog     1 MSSAGGGEFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTQV 65

  Fly    62 RLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNK 126
            |||||||||||||||||||||||||:|||||||||.|||.|||||||||||||||||||||||||
 Frog    66 RLQLWDTAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 130

  Fly   127 TDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDMQEVV 191
            |||:||||::|||||::||||:|||||||||.|||||||||||||||||||||..|..|||.::.
 Frog   131 TDLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDMIDIK 195

  Fly   192 LKDSPNETKDPEGGCAC 208
            | :.|.|....|.||:|
 Frog   196 L-EKPPEQPVTESGCSC 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab6	NP_001285869.1	Rab6	13..173	CDD:206654	149/160 (93%)
rab41	XP_012823317.1	Rab6	16..177	CDD:206654	149/160 (93%)
		RAB	16..174	CDD:197555	146/157 (93%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	357	1.000	Inparanoid score	I2176
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1277051at2759
OrthoFinder	1	1.000	-	-		FOG0000767
OrthoInspector	1	1.000	-	-		otm49338
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X452
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.060