DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and AT1G69420

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_177101.2 Gene:AT1G69420 / 843274 AraportID:AT1G69420 Length:596 Species:Arabidopsis thaliana


Alignment Length:197 Identity:48/197 - (24%)
Similarity:76/197 - (38%) Gaps:73/197 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   466 AKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGFTMLYV 530
            :||||||::||..|||||.::.||:|.||...||..::|           |.:.::::..|.::|
plant   176 SKHCRVCDKCVDRFDHHCRWLNNCIGKRNYRKFFSLMVS-----------AIFLLIMQWSTGIFV 229

  Fly   531 L----------------------GLIEAVVFCGLGWILTCTSILHACMNLTTNEMFNY------- 566
            |                      .||..|:..|:     || :|.....|...::|.:       
plant   230 LVLCLLRRNQFNADIALKLGSSFSLIPFVIVVGV-----CT-VLAMLATLPLAQLFFFHILLIKK 288

  Fly   567 --KRYPYLRDKRGRYQNPFSRG----PILNLLEFFV----------------CLPDRGDDNDLLL 609
              ..|.|:...|.:.|...:.|    |.::::..|.                |.|.|     |.|
plant   289 GISTYDYIVALREQEQELEAGGGQQSPQMSMISSFTGLSSASSFNTFHRGAWCTPPR-----LFL 348

  Fly   610 ED 611
            ||
plant   349 ED 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 34/131 (26%)
AT1G69420NP_177101.2 zf-DHHC 164..296 CDD:279823 35/136 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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