DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and AT4G15080

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001328372.1 Gene:AT4G15080 / 827172 AraportID:AT4G15080 Length:718 Species:Arabidopsis thaliana


Alignment Length:138 Identity:38/138 - (27%)
Similarity:57/138 - (41%) Gaps:41/138 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 CHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYC 519
            |..|.......:||||.|::||..|||||.::.||||.:|.|.|                     
plant   176 CTLCNAEVRKFSKHCRSCDKCVDCFDHHCRWLNNCVGRKNYMTF--------------------- 219

  Fly   520 VMIEGFTMLYVLGLIEAVVFCGLGWILTCTSILHACMNLTTNEMFNYKRYPYLRDKRGRYQNPFS 584
            :.:...::|::  ||||    |:| |.....:.....::.| |:.|            |..|.||
plant   220 ISLMAVSLLWL--LIEA----GVG-IAVIVRVFVNKKDMET-EIVN------------RLGNGFS 264

  Fly   585 RGPILNLL 592
            |.|...::
plant   265 RAPFATVV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 32/111 (29%)
AT4G15080NP_001328372.1 DHHC 171..307 CDD:396215 38/138 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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