DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patsas and AT3G22180

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_188857.1 Gene:AT3G22180 / 821782 AraportID:AT3G22180 Length:706 Species:Arabidopsis thaliana


Alignment Length:192 Identity:49/192 - (25%)
Similarity:71/192 - (36%) Gaps:63/192 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 YIPLSSDAYYRAIKQIPYFDKLKKR-------NVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFD 480
            |.||:...|...::     |..||.       |......|..|.|.....:||||.|::||..||
plant   140 YNPLAVFCYVFVVE-----DCRKKEGPAEEQGNSEEALFCTLCNCEVRKFSKHCRSCDKCVDCFD 199

  Fly   481 HHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGFTMLYVLGLIEAVVFCGLGWI 545
            |||.::.||||.:|.:.|                     |.:...::|::  :|||.|...:   
plant   200 HHCKWLNNCVGRKNYVTF---------------------VSLMSASLLWL--IIEAAVGIAV--- 238

  Fly   546 LTCTSILHACMNLTT--NEMFNYKRYPYLRDKRGRYQNPFSRGP------ILNLLEFFVCLP 599
                 |:...:|..|  .|:.|            |..|.|||.|      :...:..|.|.|
plant   239 -----IVRVFVNKQTMETEIVN------------RLGNSFSRAPLAAVVGLCTAVAIFACFP 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 32/113 (28%)
AT3G22180NP_188857.1 DHHC 168..305 CDD:366691 41/159 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.