DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and AT2G33640

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_180922.2 Gene:AT2G33640 / 817930 AraportID:AT2G33640 Length:565 Species:Arabidopsis thaliana


Alignment Length:352 Identity:72/352 - (20%)
Similarity:118/352 - (33%) Gaps:142/352 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 WGYPMYMIRAIPIT-WNILRRSHYCFI---------------------YWNAVMWISWAIANRRD 420
            |..|.:..:.:.|| :.:|..::|.|.                     :...|::|.....:..|
plant     7 WQLPAHTFQVVAITVFFLLTVAYYAFFAPFLGNKLYEYIAIGVYSFLAFSVLVLYIRCTGIDPAD 71

  Fly   421 PG-----------------YIPLSSDA-----YYR-----------------AIKQIPYFDKLKK 446
            ||                 |:|.::.|     |.|                 .|:......:.::
plant    72 PGIFVKADNTPAHKSQNSNYVPENASAIDGGPYIRHGSGCCSAIGRFICGCLVIQDCRRDTQQEQ 136

  Fly   447 RNVMLTRL-CHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFF------LFVLS 504
            .|.....| |..|.....:.:||||.|.:||..|||||.::.||||.:|.:.|.      .|.|.
plant   137 SNEQEEALFCSLCNAEVRMFSKHCRSCGKCVDGFDHHCRWLNNCVGQKNYISFVCLMAASFFWLI 201

  Fly   505 VAVNCSFTIYFACYCVMIEGFTMLYVLGLIEAVVFCGLGW--------ILTCTSI-LHACMNLTT 560
            .......|::..|:   ::...|.::  :.|.:   |||:        ::.||:: |.|.:.|  
plant   202 AEFGVGVTVFVRCF---VDQKAMEHL--ITEKL---GLGFSRPPFAAVVVVCTTLSLLALIPL-- 256

  Fly   561 NEMFNY---------KRYPY---LR-------------DKRGRYQNPFS---------------- 584
            .|:|.:         ..|.|   ||             |:..:|.:|.|                
plant   257 GELFFFHMILIRKGITTYEYVVALRAQTEPLGTSVDELDQTSQYPSPASSAVTATSARSSLGLSI 321

  Fly   585 --RGPILNLLEFFVCLP-----DRGDD 604
              ||..|       |.|     |:.||
plant   322 QYRGASL-------CTPPNIFVDQQDD 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 36/135 (27%)
AT2G33640NP_180922.2 DHHC 145..277 CDD:396215 37/141 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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