DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and zdhhc5b

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_009289570.1 Gene:zdhhc5b / 792560 ZFINID:ZDB-GENE-101117-1 Length:658 Species:Danio rerio


Alignment Length:280 Identity:77/280 - (27%)
Similarity:124/280 - (44%) Gaps:79/280 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 KKSRWIPSVSESWGWLFGGAGDSKGPLFLFLFSVLLWGYPMYMIRAIPITWNILRRSHYCFI-YW 405
            :.||::| ||.:..:|.|..       .|||.....|                |......|| .:
Zfish    21 RPSRYVP-VSAATAFLVGAT-------TLFLCFTCPW----------------LSEKFSSFIPLY 61

  Fly   406 NAVMWI----SWAIANRRDPGYIPLSSDAY-----YRAIKQIPYFDKLKKRNVML-TRLCHSCRC 460
            |.|:::    ::.:|...|||..|.:.:..     :||    |.:..::.|.:.: .:.|.:||.
Zfish    62 NVVVFLFTLANFCMATFMDPGVFPRAEEDEDKEDDFRA----PLYKTVEVRGIQVRMKWCSTCRF 122

  Fly   461 LRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGF 525
            .||.|..||.||:.||..||||||::.||:|.||..:||||:||:.|          :.:.:.||
Zfish   123 YRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTV----------HIMDVFGF 177

  Fly   526 TMLYV------LGLIEA----VVFC--GLGWI----LTCTSILHACMNLTTNEMFNYKRYPYLRD 574
            ::||:      |.|:::    .|.|  ||.::    ||...::......||||...         
Zfish   178 SLLYILHHTKQLDLVQSGVTMAVMCVAGLFFVPVAGLTGFHVVLVARGRTTNEQVT--------- 233

  Fly   575 KRGRYQ---NPFSRGPILNL 591
              |:::   |||:.|...|:
Zfish   234 --GKFRGGVNPFTHGCFKNI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 46/127 (36%)
zdhhc5bXP_009289570.1 DHHC 110..235 CDD:396215 46/145 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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