DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and Zdhhc20

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_006519721.1 Gene:Zdhhc20 / 75965 MGIID:1923215 Length:475 Species:Mus musculus


Alignment Length:309 Identity:76/309 - (24%)
Similarity:112/309 - (36%) Gaps:93/309 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 GWLFGGAGDSKGPLFLFLFSVLLWGYPMYMIRAIPITWN----------ILRRSHYCFI--YWNA 407
            ||:         |: ||:..|::|.|..|::.....|.:          .|...|..|:  .|:.
Mouse   110 GWV---------PV-LFITFVVVWSYYAYVVELCVSTISRTGEKGKTVVYLVAFHLFFVMFVWSY 164

  Fly   408 VMWISWAIANRRDPGYIPLSSDAYY--------------RAIKQIPYFDKLKKRNVMLTRLCHSC 458
            .|.|..:.|:.....|:..|....|              ||.:.:|.:.....:.:   |.|..|
Mouse   165 WMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQDILRRAARDLPIYTTSASKAI---RYCEKC 226

  Fly   459 RCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIE 523
            :.::|.||.||..|:|||...|||||::.||||..|..:|.||:|          |...||:.:.
Mouse   227 QLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFTNYKFFMLFLL----------YSLLYCLFVA 281

  Fly   524 GFTMLY----------------------VLGLIEA---VVFCGLGWILTCTSIL----HAC---- 555
            ...:.|                      ||....|   |:|......:...|:|    :.|    
Mouse   282 ATVLEYFIKFWTLCRRKSTENCPKNEPTVLNFPSAKFHVLFLFFVSAMFFVSVLSLFSYHCWLVG 346

  Fly   556 MNLTTNEMFNYKRYPYLRDKRGRYQNPFSRGPILNLLEFFVCLPDRGDD 604
            .|.||.|.|....:.|..|..|     ||.|...|..:.|      ||:
Mouse   347 KNRTTIESFRAPMFSYGIDGNG-----FSLGCSKNWRQVF------GDE 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 42/144 (29%)
Zdhhc20XP_006519721.1 DHHC 111..411 CDD:388695 75/308 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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