DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and Zdhhc1

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001365935.1 Gene:Zdhhc1 / 70796 MGIID:1918046 Length:484 Species:Mus musculus


Alignment Length:321 Identity:77/321 - (23%)
Similarity:113/321 - (35%) Gaps:106/321 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 LCEKSQLDLEPRDKNGKTPIMLAQAHQHQDVVRLLYGEVKKKSRWIPSVSESW--------GWLF 358
            :|.|      |.:|......:.....|.......|.|:..:::.|      ||        .|| 
Mouse     3 ICNK------PSNKTAPEKSVWTAPSQDSGPSPELQGQRSRRNGW------SWPPHPLQIVAWL- 54

  Fly   359 GGAGDSKGPLFLFLFSVLLWGYPMYMIRAIPITWNILRRSHYCF---------IYWNAVMWISWA 414
                     |:|| |:|:.:|   .::..:|..|  :...:.|.         ::..||. |..|
Mouse    55 ---------LYLF-FAVIGFG---VLVPLLPHHW--VPAGYACMGAIFAGHLVVHLTAVS-IDPA 103

  Fly   415 IANRRDPGYI-PLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSY 478
            .||.||..|. ||            |.|::.:..:|:....|:.|......|:|||..||:||..
Mouse   104 DANVRDKSYSGPL------------PIFNRSQHAHVIEDLHCNLCDVDVSARSKHCSACNKCVCG 156

  Fly   479 FDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGF------------------ 525
            |||||.::.||||.||...|...|.|..:.....:..|.| |.:|.|                  
Mouse   157 FDHHCKWLNNCVGERNYRLFLHSVASALLGVLLLVLVATY-VFVEFFVNPMRLRTNQHFEVLKNH 220

  Fly   526 ------------------------TMLYVLGLIEAVVFCGLGWILTCTSILHACMNLTTNE 562
                                    .:|.:|||:...:   ||.:| |..|......|||.|
Mouse   221 TDVWFVFLPAAPVETQAPAILALAALLILLGLLSTAL---LGHLL-CFHIYLMWHKLTTYE 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738 1/3 (33%)
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786 3/11 (27%)
Ank_4 283..336 CDD:316185 5/33 (15%)
DHHC 455..567 CDD:334580 42/150 (28%)
Zdhhc1NP_001365935.1 Mediates interaction with STING1. /evidence=ECO:0000250|UniProtKB:Q8WTX9 1..268 73/310 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 7/40 (18%)
DHHC 126..281 CDD:396215 43/157 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..415
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..484
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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