DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and Zdhhc6

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001028745.1 Gene:Zdhhc6 / 66980 MGIID:1914230 Length:413 Species:Mus musculus


Alignment Length:179 Identity:45/179 - (25%)
Similarity:76/179 - (42%) Gaps:45/179 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 GPLF----------LFLFSVLLWGYPMYMIRA-----IPITWNILRRSHYCFIYWNAVMWISWAI 415
            ||:.          :.:...:||.:|::....     :.|.|.::    ..:.|:||:.      
Mouse    23 GPIIALGVIAICSTMAMIDSVLWYWPLHTTGGSVNFIMLINWTVM----ILYNYFNAMF------ 77

  Fly   416 ANRRDPGYIPLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFD 480
               ..||::|..             :...|.::.|..:.|..|:..:..|:.|||.|||||...|
Mouse    78 ---AGPGFVPRG-------------WKPEKSQDSMYLQYCKVCQAYKAPRSHHCRKCNRCVMKMD 126

  Fly   481 HHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGFTMLY 529
            ||||:|.||.|.:|...|.||:|...:.|:    .|.:..::..:|.||
Mouse   127 HHCPWINNCCGHQNHASFTLFLLLAPLGCT----HAAFIFVMTMYTQLY 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 30/75 (40%)
Zdhhc6NP_001028745.1 DHHC 95..241 CDD:366691 31/81 (38%)
SH3_2 317..396 CDD:369452
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q9H6R6 410..413
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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