DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patsas and zdhhc23b

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001003757.1 Gene:zdhhc23b / 445301 ZFINID:ZDB-GENE-040808-13 Length:425 Species:Danio rerio


Alignment Length:344 Identity:76/344 - (22%)
Similarity:130/344 - (37%) Gaps:80/344 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 PIMLAQAHQHQDVVRLLYGEVKKKSRWIPSVSESWGWLFGGAGDSKGPLFLF----LFSVLLWGY 380
            |::|.....|...:..|.|.:...:  :| ::..|.:.|  ....||....|    ||| |.:.:
Zfish    87 PLILLPVFLHIAALHYLLGIIMLTA--MP-ITVLWYYFF--THRKKGRTLFFLGLALFS-LFYMF 145

  Fly   381 PMYMIRAIP---ITWNILRRSHYCFIYWNAVMWISWAIANRRDPGYI-PLSSD-----AYYRAIK 436
            .:::.:.:|   :|     ......:.....:.:.:.:..:|.||.: |..|:     .|:....
Zfish   146 YLFLTQVVPRGEVT-----ELQLAVVTAGVALTVIFLMLTKRGPGLVRPRPSETHSTVTYHSTPP 205

  Fly   437 QIP--YFDKLKKRNVMLTRL-----------------------CHSCRCLRPLRAKHCRVCNRCV 476
            .:.  |.:..:.:.|:.:|:                       |..|:.:||.||.|||:|..||
Zfish   206 DVDGVYLNGARHQVVIGSRVASSEHTGEPGTEEEEEGVQKRNWCAVCKVVRPRRAGHCRICGVCV 270

  Fly   477 SYFDHHCPFIYNCVGLRNRMWFFL----FVLSVAVNCSFTIYFAC----------YCVMI---EG 524
            ...||||.:|.:||||.|...|.|    |:|:.....|..:...|          ||..:   ..
Zfish   271 LRLDHHCVWINSCVGLANHRTFLLTLLFFLLTSIFGISLVLASVCPDQRVLTALFYCPDVYSQYS 335

  Fly   525 FTMLYVLGLIEAVVFCGLGWILTCTSILHACMNLTTNEMFNYKRYPYLRDKRGR--------YQN 581
            ..:.:......::|..||..:| ...||:..:|:|..|    .|.. ||:|..:        :..
Zfish   336 SALCFTCAWYSSIVTGGLLHLL-LLQILNISLNVTERE----ARLA-LREKSAQRRLWGLIVHTG 394

  Fly   582 PFSRGPILNLLEFFVCLPD 600
            .:|||...|..||.....|
Zfish   395 HYSRGFWSNWTEFLTMTED 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185 3/15 (20%)
DHHC 455..567 CDD:334580 39/128 (30%)
zdhhc23bNP_001003757.1 7TMR-DISM_7TM <62..179 CDD:284997 17/102 (17%)
zf-DHHC <244..>350 CDD:303066 30/105 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.