DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and CG5880

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster


Alignment Length:169 Identity:43/169 - (25%)
Similarity:68/169 - (40%) Gaps:31/169 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 WLFGGAGDSKGPLFLF--------LFSVLLW-GYPMYMIRAIPITWNILRRSHYCFIYWNAVMWI 411
            |.........||.|:.        :.|:..| |.|.:..::..:|:.:|...::..:  |.|...
  Fly    53 WFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPFWWAKSQLVTYFLLIVGNWLLL--NVVFHY 115

  Fly   412 SWAIANRRDPGYIPLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCV 476
            ..|:..   |...|....:...|:.                 :|..|...:|.|..||.:||||:
  Fly   116 VMAVIT---PAGHPPEGVSLVEAVS-----------------MCGKCIAPKPPRTHHCSICNRCI 160

  Fly   477 SYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYF 515
            ...|||||::.||||..|..:|||::....:.|.|.|.|
  Fly   161 LKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILF 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 27/61 (44%)
CG5880NP_651539.3 zf-DHHC 139..>201 CDD:279823 27/61 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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