DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patsas and zdhhc16a

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_017214210.1 Gene:zdhhc16a / 394017 ZFINID:ZDB-GENE-040426-1621 Length:395 Species:Danio rerio


Alignment Length:404 Identity:99/404 - (24%)
Similarity:144/404 - (35%) Gaps:152/404 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 STPLHLACLSGNMTCVRLLCEKSQLDLEPRDKNGKTPIMLAQAHQHQDVVRLLYGEVKKKSRWIP 348
            |:.|||.     :.|:|..|         |....:.|..|   .:|...:||::     ||.:..
Zfish    13 SSVLHLL-----LRCMRGCC---------RHTRSRVPRRL---RRHVSYIRLIF-----KSLYFN 55

  Fly   349 SVSES------------W------GWLFGGAGDSKGPLFLFLF-----SVLLWGY----PMYMIR 386
            |::.|            |      .|.        |.:|:||.     ||:...|    |:.:..
Zfish    56 SLTNSDVVTDSILEPVFWMVEVVTRWF--------GMVFVFLVVALTSSVVFIAYFCLLPLVLHT 112

  Fly   387 AIPITWNILRRSHYCFIYWNAVMWISWAIANRRDPGYIPLSSDAYYRAIKQIPYFDKLKKRNVML 451
            ..| .|.|.   |.|:.:||.||.:.                 .||:|.|..|.:....|.:|..
Zfish   113 YSP-GWMIW---HICYGHWNLVMIVF-----------------HYYKATKTPPGYPPKMKTDVPF 156

  Fly   452 TRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFA 516
            ..:|..|...:|.|:.||.:|..|:...|||||::.||||..|..:||.|.|.:.:.|       
Zfish   157 VSVCKKCIIPKPARSHHCGICKTCILKMDHHCPWLNNCVGHFNHRYFFSFCLFLTLGC------- 214

  Fly   517 CYC------VMIEGFTMLYVLGLIEA----VVFCGLG---------------------------- 543
            .||      :.|:.:..:..|..:||    |...|:|                            
Zfish   215 MYCSVSGRHLFIDAYNTIDQLKHLEAEKQGVPVTGIGLLIGIVPSAGVAGKAVQVAQEVSQPPYT 279

  Fly   544 -------------WILTCT--------SILHACMNLTTNEM-----FNYKRYPYLRDKRGR-YQN 581
                         |:||.|        ::.||.: :|..|.     .|.|....|. |||| |:|
Zfish   280 YKDRMFHKSVIYMWVLTSTVSVALGALTLWHALL-ITRGETSIERHINGKEAKRLA-KRGRVYRN 342

  Fly   582 PFSRGPILNLLEFF 595
            |||.|.:.|...||
Zfish   343 PFSYGKLNNWKVFF 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738 7/21 (33%)
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786 7/29 (24%)
Ank_4 283..336 CDD:316185 12/51 (24%)
DHHC 455..567 CDD:334580 41/175 (23%)
zdhhc16aXP_017214210.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.