DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and CG4483

DIOPT Version :10

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_648294.1 Gene:CG4483 / 39057 FlyBaseID:FBgn0035970 Length:435 Species:Drosophila melanogaster


Alignment Length:271 Identity:66/271 - (24%)
Similarity:108/271 - (39%) Gaps:68/271 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 WGYPMYMIRAIPITWNILRRSHYCFIYW-----------NAVMWI-------SWAIANRRDPGYI 424
            ||....:...:.:||.::   |...::|           .|::||       ::..:....||::
  Fly    15 WGPITLLTLTLIVTWTVI---HMNSMWWAPGSSLESVLNYALIWIQTFGTLYNFIRSLMVGPGFV 76

  Fly   425 PLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNC 489
            ||         |..|...|.|    |..:.|..|...:..|:.|||.|||||...|||||:|..|
  Fly    77 PL---------KWHPQLTKDK----MFLQFCTRCNGYKAPRSHHCRRCNRCVMKMDHHCPWINTC 128

  Fly   490 VGLRNR---MWFFLFVLSVAVNCSFTIYFACYCVMIEGFTMLYVL---------------GLIEA 536
            ||..|:   ::|.||.:|.:::....|..|    :|.|....:::               .|:..
  Fly   129 VGWSNQDSFVYFLLFFMSGSIHGGIIIVSA----VIRGIKKRWLIRYGLRHMATVHLTQTNLLAC 189

  Fly   537 VVFCG--LGWILTCTSILHACM-----NLTTNEMFNYKRYPYLRDKRGR-----YQNPFSRGPIL 589
            |...|  :|.:|....:|:..|     |.|..|.:..|:..:.|:...|     :..|::.|...
  Fly   190 VFSLGVIMGTVLASIKLLYMQMKSILKNQTEIENWIVKKAAFRRNAYPRKGIKPFVYPYNLGWKT 254

  Fly   590 NLLEFFVCLPD 600
            |:.|.|....|
  Fly   255 NMREVFFSTGD 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 99..343 CDD:440430
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
DHHC 453..567 CDD:396215 39/138 (28%)
CG4483NP_648294.1 DHHC 88..224 CDD:396215 41/143 (29%)
Blue background indicates that the domain is not in the aligned region.

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