DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and Zdhhc6

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001032741.1 Gene:Zdhhc6 / 361771 RGDID:1304657 Length:413 Species:Rattus norvegicus


Alignment Length:179 Identity:44/179 - (24%)
Similarity:75/179 - (41%) Gaps:45/179 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 GPLF----------LFLFSVLLWGYPMYMIRA-----IPITWNILRRSHYCFIYWNAVMWISWAI 415
            ||:.          :.:...:||.:|::....     :.|.|.::    ..:.|:||:.      
  Rat    23 GPIIALGVIAICSTMAMIDSVLWYWPLHTTGGSVNFIMLINWTVM----ILYNYFNAMF------ 77

  Fly   416 ANRRDPGYIPLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFD 480
               ..||::|..             :.....::.|..:.|..|:..:..|:.|||.|||||...|
  Rat    78 ---AGPGFVPRG-------------WKPENPQDSMYLQYCKVCQAYKAPRSHHCRKCNRCVMKMD 126

  Fly   481 HHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGFTMLY 529
            ||||:|.||.|.:|...|.||:|...:.|:    .|.:..::..:|.||
  Rat   127 HHCPWINNCCGHQNHASFTLFLLLAPLGCT----HAAFIFVMTMYTQLY 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 30/75 (40%)
Zdhhc6NP_001032741.1 DHHC 95..241 CDD:396215 31/81 (38%)
SH3_2 317..394 CDD:400139
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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