DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and spe-10

DIOPT Version :10

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001021339.1 Gene:spe-10 / 3565514 WormBaseID:WBGene00004964 Length:351 Species:Caenorhabditis elegans


Alignment Length:263 Identity:58/263 - (22%)
Similarity:100/263 - (38%) Gaps:77/263 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 GWLFGGAGDSKGPLFLFLFSVLLWGYPMYMIRAIPITWNI---LRRSHYCFIYWNAVMWISWAIA 416
            ||:.....:    :.||:..:||| :.:||...:.|.:.:   ::.:.|..:.....:...|::|
 Worm    22 GWILTRCLN----VLLFIQLILLW-WSLYMYVTVTIGYYVQSTIQATIYLIVGSFLFVMSMWSLA 81

  Fly   417 NR--RDPGYIPLSSDAYYRAIKQIPYFDKLK---------------------KRNVMLTRLCHSC 458
            ..  ...|.:|    ..||..|::.  |:||                     ::|.:|..:|..|
 Worm    82 KTLFTRVGRVP----ERYRPSKELE--DRLKAVTPMEKNRYVVEKSTPEQLAQQNTILEEMCTYC 140

  Fly   459 R-----------------C--LRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLS 504
            :                 |  ::|.||:||..|.:|...:|||||:|..||...|..:|.|::  
 Worm   141 KVVVAECDQVGRLKYCYECGHIKPDRARHCSSCGKCCIKYDHHCPWINMCVTHVNYKYFLLYI-- 203

  Fly   505 VAVNCSFTIYFACYCVMIEGFTMLYVLGLIEAVV--FCGLGWILTCTSILHACMNLTTNEMFNYK 567
              :..||.:|:             |:|..:|..|  |....|.......|....:.....:|.| 
 Worm   204 --IYTSFLVYW-------------YLLTSLEGAVRYFINQQWTDELGKFLFYLFSFIVGGVFGY- 252

  Fly   568 RYP 570
             ||
 Worm   253 -YP 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 99..343 CDD:440430
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
DHHC 453..567 CDD:396215 32/134 (24%)
spe-10NP_001021339.1 DHHC 151..277 CDD:396215 33/123 (27%)
Blue background indicates that the domain is not in the aligned region.

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