DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patsas and zdhhc8b

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_840089.2 Gene:zdhhc8b / 352941 ZFINID:ZDB-GENE-030407-3 Length:751 Species:Danio rerio


Alignment Length:211 Identity:62/211 - (29%)
Similarity:102/211 - (48%) Gaps:54/211 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 WNAVMWI----SWAIANRRDPGYIPLS-----SDAYYRAIKQIPYFDKLKKRNVML-TRLCHSCR 459
            :|.::::    ::::|...|||..|.:     .|..:||    |.:..::.:.:.: .:.|.:|.
Zfish    50 YNGIVFLFVLANFSMATFMDPGVFPRADEDEDKDDDFRA----PLYKNVEIKGIQVRMKWCATCH 110

  Fly   460 CLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEG 524
            ..||.|..||.||:.||..||||||::.||:|.||..:||||:||::|          :.|.:..
Zfish   111 FYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLSV----------HMVGVFS 165

  Fly   525 FTMLYVLGLIEA----------VVFC--GLGWI----LTCTSILHACMNLTTNEMFNYKRYPYLR 573
            |.:|::|..:|.          ||.|  ||.:|    ||...::......||||...        
Zfish   166 FGLLFMLHHLETLSALHTTVTLVVMCVTGLFFIPVMGLTGFHMVLVARGRTTNEQVT-------- 222

  Fly   574 DKRGRYQ---NPFSRG 586
               |:::   |||:||
Zfish   223 ---GKFRGGVNPFTRG 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 46/127 (36%)
zdhhc8bNP_840089.2 zf-DHHC 99..224 CDD:279823 46/145 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..346
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..461
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 633..659
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 666..685
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 703..736
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.