DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and Zdhhc3

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_038937239.1 Gene:Zdhhc3 / 301081 RGDID:1309041 Length:350 Species:Rattus norvegicus


Alignment Length:347 Identity:78/347 - (22%)
Similarity:139/347 - (40%) Gaps:90/347 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 IMLAQAHQHQDVVRLLYGEVKKKSRWIP-----SVSESWGWLFGGAGDSKGPLFLFLFSVLLWGY 380
            :||...|..:|:.|  ..|..:..:..|     .|...| ::..|.|.:...:..||  ||...:
  Rat     1 MMLIPTHHFRDIER--KPEYLQPEKCAPPPFPGPVGTMW-FIRDGCGIACAIVTWFL--VLYAEF 60

  Fly   381 PMYMIRAIP---ITWNILRRSHYCFIYWNAVMWISWAI---ANRRDPGYIPLSSDAYYRAIKQIP 439
            .:..:..||   ..::|:..     |.:|.:.:::.|.   |...|||.:|..:     |.|:  
  Rat    61 VVLFVMLIPSRDYAYSIING-----IVFNLLAFLALASHCRAMLTDPGAVPKGN-----ATKE-- 113

  Fly   440 YFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLS 504
            :.:.|:.:...:...|..|..::|.||.||.||.||:...|||||::.||||..|:.:|.||.:.
  Rat   114 FIESLQLKPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMY 178

  Fly   505 VAVNCSFTIYFACYCVMIEGF---------------------TMLYVLGLIEAVVFCGLGWILTC 548
            :|:       .:.:.:::.||                     .:|.:|...||::|.....::..
  Rat   179 IAL-------ISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEALLFLIFTSVMFG 236

  Fly   549 TSILHACMNLTTNEMFNYKRYPYLRDKRGRYQ---------------NPFSRGPILNLLEFFVCL 598
            |.:...|.:.|..|.....:.|  |::.|.::               |||:|          .|.
  Rat   237 TQVHSICTDETGIERLQRSKQP--REQSGSWKSVQEAFGGEFSLNWFNPFTR----------PCQ 289

  Fly   599 PDRGDDNDLLLE-------DNI 613
            |:...|..|:.:       ||:
  Rat   290 PEIPIDKGLVRQVSSLSNMDNV 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185 5/14 (36%)
DHHC 455..567 CDD:334580 36/132 (27%)
Zdhhc3XP_038937239.1 DHHC 128..253 CDD:396215 36/131 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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