DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patsas and Zdhhc5

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_659136.1 Gene:Zdhhc5 / 228136 MGIID:1923573 Length:715 Species:Mus musculus


Alignment Length:278 Identity:79/278 - (28%)
Similarity:127/278 - (45%) Gaps:77/278 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 GEVKKKSRWIPSVSESWGWLFGGAGDSKGPLFLFLFSVLLWGYPMYMIRAIPITWNILRRSHYCF 402
            |:..|.|:::| ||.:..:|.|..     .||   |:....|..:.:..|:||            
Mouse     6 GKRFKPSKYVP-VSAAAIFLVGAT-----TLF---FAFTCPGLSLNVSPAVPI------------ 49

  Fly   403 IYWNAVMWI----SWAIANRRDPGYIPLSSDAY-----YRAIKQIPYFDKLKKRNVML-TRLCHS 457
              :||:|::    ::::|...|||..|.:.:..     :||    |.:..::.:.:.: .:.|.:
Mouse    50 --YNAIMFLFVLANFSMATFMDPGIFPRAEEDEDKEDDFRA----PLYKTVEIKGIQVRMKWCAT 108

  Fly   458 CRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMI 522
            ||..||.|..||.||:.||..||||||::.||:|.||..:||||:||:          ..:.:.:
Mouse   109 CRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSL----------TAHIMGV 163

  Fly   523 EGFTMLYVLGLIEAV----------VFC--GLGWI----LTCTSILHACMNLTTNEMFNYKRYPY 571
            .||.:||||..||.:          |.|  ||.:|    ||...::......||||...      
Mouse   164 FGFGLLYVLYHIEELSGVRTAVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVT------ 222

  Fly   572 LRDKRGRYQ---NPFSRG 586
                 |:::   |||:.|
Mouse   223 -----GKFRGGVNPFTNG 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 48/127 (38%)
Zdhhc5NP_659136.1 zf-DHHC 99..224 CDD:279823 48/145 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 289..715
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.