DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and dhhc-13

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_500889.2 Gene:dhhc-13 / 186797 WormBaseID:WBGene00019257 Length:593 Species:Caenorhabditis elegans


Alignment Length:572 Identity:142/572 - (24%)
Similarity:234/572 - (40%) Gaps:129/572 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GEVSEVENLVDKFGMECLSARDRHGYTPAHWIALNGNVQLMRYLIERTAPIDLPCLGTQGPRPIH 189
            ||:..|..|::  |....:..|..|....||.|:|..:.:::.|:...|.|:| ..|.....|:|
 Worm    46 GEIQTVRFLLN--GHVSANEFDHEGCGLLHWAAINNKLDIIQLLLSHRADINL-IGGNMKSTPLH 107

  Fly   190 WACRKGHASVVQVLLQAGVAVNAADFKGLTPLHLACMYGRTATAAYLLGMGALNNLTDIN---GD 251
            |||.......|..|::.|......:..|.||||||...|.....||||  ...:|:.|..   |.
 Worm   108 WACYNSQFGAVMALVKNGADPTIKNINGETPLHLAACTGNFIIIAYLL--VKFDNIKDTRDNLGR 170

  Fly   252 TALHWAAYKGHADLMRLLMYSGVE--LQKTDN-FGSTPLHLACLSGNMT-CVRLLCEKSQLDLEP 312
            :||..||.|... |..:.:::.|:  |..||: .|:|.||:.....|:. .|.|:|  |..|...
 Worm   171 SALMMAADKSFG-LFPIRIFTKVDAYLDFTDDEKGNTALHILAARQNLKGVVELIC--SGADDTK 232

  Fly   313 RDKNG---------KTPIMLAQAHQHQDVVRLLYGEVKKK--SRWI------PSVSESWGWLFGG 360
            .|.||         |...::.:....:::..|  |.:.:|  |||.      .::|   |.:.|.
 Worm   233 TDNNGVSARDLMDNKFRNLVDKQVTARNICEL--GTICEKVTSRWFLGQFFTATIS---GVMIGA 292

  Fly   361 AGDSKGPLFLFLFSVLLWGY--------------PMYMIRAIPITW---------NILRRSHYCF 402
            |   .|..||..|.|:|.|.              .|.....:|:|:         .:|..:....
 Worm   293 A---TGLYFLTNFWVVLGGLALTALLLFILVQRRQMDQFGCLPVTYIFWMGIAEFALLIFNSNGL 354

  Fly   403 IYWNAVMWIS--WAIANR-------RDPGYIPLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSC 458
            ::|:.::::.  |.|:..       .:||.:|.|:..:...||.:        ....:.|.|.:|
 Worm   355 VHWSVLIFVCSIWVISASFYWILILTNPGVLPRSTTPFKDFIKDL--------EEKQIDRYCFTC 411

  Fly   459 RCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIE 523
            ...:...:.||..|::||..||||||:|:.||..:|...|..|.|::.:   |.:::....:.:.
 Worm   412 WIPKTSSSHHCSQCDKCVDGFDHHCPWIHKCVYRKNLRAFVFFCLTIFM---FHVFYVLLLLYMI 473

  Fly   524 GFTM-------------LYVLGLIEAV--VFCGLGWILTCTSILHACMNLTTNEMFNYKR----- 568
            |.:|             |.|:.||.|:  || |.| .:|||.......:::|.|:...:|     
 Worm   474 GASMNASGFEQTLNDHGLMVISLILAIPHVF-GAG-AITCTQFSQISRHVSTIEIIRKQRLQRNS 536

  Fly   569 ------------YPYLRDKRGRYQNPFSRGPILNLLEFFVCLPDR-GDDNDL 607
                        :.|.:..:.|.:|      :.|||.|     |: ||..::
 Worm   537 SEKTITSPEHNPWEYKQSVKTRIRN------VCNLLAF-----DKFGDGEEI 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738 57/187 (30%)
ANK repeat 148..181 CDD:293786 9/32 (28%)
ANK repeat 187..214 CDD:293786 8/26 (31%)
ANK repeat 216..247 CDD:293786 13/30 (43%)
ANK repeat 249..280 CDD:293786 9/35 (26%)
ANK repeat 282..314 CDD:293786 10/32 (31%)
Ank_4 283..336 CDD:316185 14/62 (23%)
DHHC 455..567 CDD:334580 37/126 (29%)
dhhc-13NP_500889.2 ANK 42..155 CDD:238125 34/111 (31%)
Ank_2 42..132 CDD:289560 24/88 (27%)
ANK repeat 67..98 CDD:293786 9/31 (29%)
ANK repeat 101..132 CDD:293786 8/30 (27%)
Ank_5 121..176 CDD:290568 19/56 (34%)
ANK 130..>240 CDD:238125 38/114 (33%)
Ank_5 198..243 CDD:290568 15/46 (33%)
ANK repeat 206..234 CDD:293786 9/29 (31%)
zf-DHHC 405..530 CDD:279823 38/129 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2373
OMA 1 1.010 - - QHG54696
OrthoDB 1 1.010 - - D213306at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101007
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X628
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.680

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